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Research interests

Np-complete problems in biology; transcription regulation, comparative regulomics, pattern recognition and large-scale genome sequencing methods.

All our research is performed in silico. Projects that require 'wet-lab' experimentation and verification, we rely on our collaborators.

Home > Research > Recent thesis

Recent thesis

PhD thesis

Ellen Sherwood, Methods and Applications in DNA Sequence Alignments, 2007. Karolinska Institutet.
Erik Arner, Solving Repeat Problems in Shotgun Sequencing, 2006. Karolinska Institutet.

MSc. thesis

Rahul Thadani, A Parallel Approach to miRNA Target Prediction, 2007. Department of Biological Sciences, National University of Singapore.

Honours thesis

Lian Mulan Michelle, Development of B-cell epitope predictors for Chikungunya virus, 2009. Department of Biological Sciences, National University of Singapore.
Tran Thi Minh, Phuong, Genome analysis and comparative genomics on Acinetobacter genomospecies 3, 2008. Department of Biological Sciences, National University of Singapore.
Shen Jean, Lim, Assessment and comparison of software tools for allergen cross-reactivity prediction, 2008. Department of Biological Sciences, National University of Singapore.
Sperber, Henrik, MicroRNAs in Candidate Gene Regions of Schizophrenia, FYP 2007. Uppsala University / National University of Singapore.
Zhu Huihui, Epitope Mapping of Major Fungal Allergens, 2007. Department of Biological Sciences, National University of Singapore.
Shamima Banu, A Comparison of Support Vector Machine (SVM) Performance on General Protein-Protein Interactions and Virus-Host Protein Interactions, 2007. Department of Biological Sciences, National University of Singapore.
Hu Yongli, Analysis and Characterization of Allergen Sequences, 2007. Department of Biological Sciences, National University of Singapore.
Gan Huiyi Lydia, Bioinformatics Approach to Fungal Allergens, 2005. Department of Biological Sciences, National University of Singapore.